Fungal 18S rRNA V4 amplicon sequencing of Green Biofilm sample 1a - SRA

SRX12094526: Fungal 18S rRNA V4 amplicon sequencing of Green Biofilm sample 1a
1 ILLUMINA (Illumina NovaSeq 6000) run: 188,158 spots, 94.1M bases, 30.3Mb downloads

Design: Fungal 18S rRNA V4 region was amplified using 528F and 706R primer set. Then, the amplified products were constructed into 250 bp paired-end library following the Illumina DNA Prep kit protocol.

Submitted by: Universiti Teknologi Malaysia

Study: Amplicon and shotgun sequencing of SKY hot spring microbial mats

PRJNA761511 • SRP336095 • All experiments • All runs

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This project aimed to identify the microbial diversities of the microbial mats found in SKY hot spring via amplicon sequencing. Besides, functional analyses, in particular the CAZymes, of the microbial mats were identified via shotgun sequencing.

Sample:

SAMN21353065 • SRS10073541 • All experiments • All runs

Organism: hot springs metagenome

Library:

Name: G1a-18S

Instrument: Illumina NovaSeq 6000

Strategy: AMPLICON

Source: METAGENOMIC

Selection: PCR

Layout: PAIRED

Runs: 1 run, 188,158 spots, 94.1M bases, 30.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR15802058	188,158	94.1M	30.3Mb	2021-09-08

ID:: 16013869

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